1) on classic there is no stacking lion eyes. 2) on classic you no longer need the black lion mark to start the quest hunt of the black lion, so the black lion mark from vanquish remnants quests was removed. 3) cargo boxes were removed. the topic you saw was prolly from beta when they were still droping..
use this with a translator of your choice and language https://web.archive.org/web/20141231063216/http://l2central.info/classic/Квесты_для_игроков_1—40_уровней what he said just make sure you using the oldest version.
i have a feeling you checking all that stuff on databases who were already updated to future versions where drops and some other stuff were increased,including rewards of some quests, or databases who have nothing to do with classic.
the problm is on the negative scores, they get reseted after restart for some reason, the positive scores and the reputatioin exchange during pvp should still be working normaly.
sry to disapoint you but thats not the drops from 1.0. this is the correct drop chance and amount for 1.0, you prolly checking archives after they were updated already.